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Items where Author is "Jimenez, J"

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Article

Kim, Juhyun, Darlington, Alexander, Salvador, Manuel, Utrilla, José and Jimenez, José I. (2020) Tradeoffs between gene expression, growth and phenotypic diversity in microbial populations Current Opinion in Biotechnology, 62. pp. 29-37.

Salvador, Manuel, Abdulmutalib, Umar, Gonzalez, Jaime, Kim, Juhyun, Smith, Alex A., Faulon, Jean-Loup, Wei, Ren, Zimmermann, Wolfgang and Jimenez, Jose (2019) Microbial Genes for a Circular and Sustainable Bio-PET Economy Genes, 10 (5).

Darlington, Alexander P S, Kim, Juhyun, Jimenez, Jose and Bates, Declan G (2018) Engineering Translational Resource Allocation Controllers: Mechanistic Models, Design Guidelines, and Potential Biological Implementations ACS Synthetic Biology, 7 (11). pp. 2485-2496.

Darlington, Alexander P.S., Kim, Juhyun, Jimenez, Jose and Bates, Declan G. (2018) Dynamic allocation of orthogonal ribosomes facilitates uncoupling of co-expressed genes Nature Communications, 9, 695.

Cavaliere, M, Feng, S, Soyer, O and Jimenez, Jose (2017) Cooperation in microbial communities and their biotechnological applications Environmental Microbiology and Environmental Microbiology Reports, 19 (8). pp. 2949-2963.

Qian, Y, Huang, H-H, Jimenez, Jose and Del Vecchio, D (2017) Resource Competition Shapes the Response of Genetic Circuits ACS Synthetic Biology, 6 (7). pp. 1263-1272.

Jimenez, Jose Ignacio (2017) Shedding light on the black box models of the cell Microbial Biotechnology, 10 (1). pp. 43-45.

Kim, Juhyun, Salvador de Lara, Manuel, Saunders, Elizabeth, Gonzalez Gutierrez De La Conch, Jaime, Avignone Rossa, Claudio and Jimenez, Jose (2016) Properties of alternative microbial hosts used in Synthetic Biology: Towards the design of a modular chassis Essays in Biochemistry, 60 (4). pp. 303-313.

Jimenez, JI, Avendaño, R, Chaves, N, Fuentes, P, Sánchez, E, Jiménez, JI and Chavarría, M (2016) Production of selenium nanoparticles in Pseudomonas putida KT2440 Scientific Reports, 6, 37155.

Xulvi-Brunet, R, Campbell, GW, Rajamani, S, Jimenez, Jose and Chen, IA (2016) Computational analysis of fitness landscapes and evolutionary networks from in vitro evolution experiments Methods, 106. pp. 86-96.

Gyorgy, A, Jimenez, JI, Yazbek, J, Huang, H-H, Chung, H, Weiss, R and Del Vecchio, D (2015) Isocost Lines Describe the Cellular Economy of Genetic Circuits BIOPHYSICAL JOURNAL, 109 (3). pp. 639-646.

Jimenez, JI, Fraile, S, Zafra, O and de Lorenzo, V (2015) Phenotypic knockouts of selected metabolic pathways by targeting enzymes with camel-derived nanobodies (VHHS) METABOLIC ENGINEERING, 30. pp. 40-48.

Freese, PD, Korolev, KS, Jimenez, JI and Chen, IA (2014) Genetic Drift Suppresses Bacterial Conjugation in Spatially Structured Populations BIOPHYSICAL JOURNAL, 106 (4). pp. 944-954.

Fraile, S, Jimenez, JI, Gutierrez, C and de Lorenzo, V (2013) NanoPad: An integrated platform for bacterial production of camel nanobodies aimed at detecting environmental biomarkers PROTEOMICS, 13 (18-19). pp. 2766-2775.

Diaz, E, Jimenez, JI and Nogales, J (2013) Aerobic degradation of aromatic compounds CURRENT OPINION IN BIOTECHNOLOGY, 24 (3). pp. 431-442.

Zafra, O, Fraile, S, Gutierrez, C, Haro, A, David Paez-Espino, A, Jimenez, JI and de Lorenzo, V (2011) Monitoring biodegradative enzymes with nanobodies raised in Camelus dromedarius with mixtures of catabolic proteins ENVIRONMENTAL MICROBIOLOGY, 13 (4). pp. 960-974.

Lin, A, Jimenez, J, Derr, J, Vera, P, Manapat, ML, Esvelt, KM, Villanueva, L, Liu, DR and Chen, IA (2011) Inhibition of bacterial conjugation by phage M13 and its protein g3p: quantitative analysis and model. PLoS One, 6 (5).

Fenu, A, Guglielmi, G, Jimenez, J, Sperandio, M, Saroj, DP, Lesjean, B, Brepols, C, Thoeye, C and Nopens, I (2010) Activated Sludge Model (ASM) based biological modelling of membrane bioreactors (MBR) processes: A critical review with special regard to MBR specificities Water Research, 44 (15). pp. 4272-4294.

Jimenez, JI, Canales, A, Jimenez-Barbero, J, Ginalski, K, Rychlewski, L, Garcia, JL and Diaz, E (2008) Deciphering the genetic determinants for aerobic nicotinic acid degradation: the nic cluster from Pseudomonas putida KT2440. Proceedings of the National Academy of Sciences of USA, 105 (32). pp. 11329-11334.

Yuste, L, Hervas, AB, Canosa, I, Tobes, R, Jimenez, JI, Nogales, J, Perez-Perez, MM, Santero, E, Diaz, E, Ramos, JL, de Lorenzo, V and Rojo, F (2006) Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray ENVIRONMENTAL MICROBIOLOGY, 8 (1). pp. 165-177.

Jimenez, JI, Minambres, B, Garcia, JL and Diaz, E (2002) Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440 ENVIRONMENTAL MICROBIOLOGY, 4 (12). pp. 824-841.

Book Section

Fenu, A., Guglielmi, G., Jimenez, J., Sperandio, M., Saroj, D. P., Lesjean, B., Brepols, C., Thoeye, C. and Nopens, I. (2011) Activated Sludge Model-Based Modeling of Membrane Bioreactor Processes: A Critical Review with Special Regard to MBR Specificities In: Environmental Biotechnology and Safety. Comprehensive Biotechnology, 6 . Academic Press, pp. 305-327. ISBN 978-0-08-088504-9

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