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Items where Author is "Jimenez, J"

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Number of items: 23.

Kim, Juhyun, Darlington, Alexander, Salvador, Manuel, Utrilla, José and Jimenez, José I. (2020) Tradeoffs between gene expression, growth and phenotypic diversity in microbial populations Current Opinion in Biotechnology, 62. pp. 29-37.

Lastiri-Pancardo, Gustavo, Mercado-Hernandez, J.S, Kim, Juhyun, Jimenez, Jose and Utrilla, Jose (2019) A quantitative method for proteome reallocation using minimal regulatory interventions bioRxiv.

Salvador, Manuel, Abdulmutalib, Umar, Gonzalez, Jaime, Kim, Juhyun, Smith, Alex A., Faulon, Jean-Loup, Wei, Ren, Zimmermann, Wolfgang and Jimenez, Jose (2019) Microbial Genes for a Circular and Sustainable Bio-PET Economy Genes, 10 (5).

Darlington, Alexander P S, Kim, Juhyun, Jimenez, Jose and Bates, Declan G (2018) Engineering Translational Resource Allocation Controllers: Mechanistic Models, Design Guidelines, and Potential Biological Implementations ACS Synthetic Biology, 7 (11). pp. 2485-2496.

Darlington, Alexander P.S., Kim, Juhyun, Jimenez, Jose and Bates, Declan G. (2018) Dynamic allocation of orthogonal ribosomes facilitates uncoupling of co-expressed genes Nature Communications, 9, 695.

Cavaliere, M, Feng, S, Soyer, O and Jimenez, Jose (2017) Cooperation in microbial communities and their biotechnological applications Environmental Microbiology and Environmental Microbiology Reports, 19 (8). pp. 2949-2963.

Qian, Y, Huang, H-H, Jimenez, Jose and Del Vecchio, D (2017) Resource Competition Shapes the Response of Genetic Circuits ACS Synthetic Biology, 6 (7). pp. 1263-1272.

Jimenez, Jose Ignacio (2017) Shedding light on the black box models of the cell Microbial Biotechnology, 10 (1). pp. 43-45.

Kim, Juhyun, Salvador de Lara, Manuel, Saunders, Elizabeth, Gonzalez Gutierrez De La Conch, Jaime, Avignone Rossa, Claudio and Jimenez, Jose (2016) Properties of alternative microbial hosts used in Synthetic Biology: Towards the design of a modular chassis Essays in Biochemistry, 60 (4). pp. 303-313.

Jimenez, JI, Avendaño, R, Chaves, N, Fuentes, P, Sánchez, E, Jiménez, JI and Chavarría, M (2016) Production of selenium nanoparticles in Pseudomonas putida KT2440 Scientific Reports, 6, 37155.

Xulvi-Brunet, R, Campbell, GW, Rajamani, S, Jimenez, Jose and Chen, IA (2016) Computational analysis of fitness landscapes and evolutionary networks from in vitro evolution experiments Methods, 106. pp. 86-96.

Gyorgy, A, Jimenez, JI, Yazbek, J, Huang, H-H, Chung, H, Weiss, R and Del Vecchio, D (2015) Isocost Lines Describe the Cellular Economy of Genetic Circuits BIOPHYSICAL JOURNAL, 109 (3). pp. 639-646.

Jimenez, JI, Fraile, S, Zafra, O and de Lorenzo, V (2015) Phenotypic knockouts of selected metabolic pathways by targeting enzymes with camel-derived nanobodies (VHHS) METABOLIC ENGINEERING, 30. pp. 40-48.

Freese, PD, Korolev, KS, Jimenez, JI and Chen, IA (2014) Genetic Drift Suppresses Bacterial Conjugation in Spatially Structured Populations BIOPHYSICAL JOURNAL, 106 (4). pp. 944-954.

Fraile, S, Jimenez, JI, Gutierrez, C and de Lorenzo, V (2013) NanoPad: An integrated platform for bacterial production of camel nanobodies aimed at detecting environmental biomarkers PROTEOMICS, 13 (18-19). pp. 2766-2775.

Diaz, E, Jimenez, JI and Nogales, J (2013) Aerobic degradation of aromatic compounds CURRENT OPINION IN BIOTECHNOLOGY, 24 (3). pp. 431-442.

Fenu, A., Guglielmi, G., Jimenez, J., Sperandio, M., Saroj, D. P., Lesjean, B., Brepols, C., Thoeye, C. and Nopens, I. (2011) Activated Sludge Model-Based Modeling of Membrane Bioreactor Processes: A Critical Review with Special Regard to MBR Specificities In: Environmental Biotechnology and Safety. Comprehensive Biotechnology, 6 . Academic Press, pp. 305-327. ISBN 978-0-08-088504-9

Zafra, O, Fraile, S, Gutierrez, C, Haro, A, David Paez-Espino, A, Jimenez, JI and de Lorenzo, V (2011) Monitoring biodegradative enzymes with nanobodies raised in Camelus dromedarius with mixtures of catabolic proteins ENVIRONMENTAL MICROBIOLOGY, 13 (4). pp. 960-974.

Lin, A, Jimenez, J, Derr, J, Vera, P, Manapat, ML, Esvelt, KM, Villanueva, L, Liu, DR and Chen, IA (2011) Inhibition of bacterial conjugation by phage M13 and its protein g3p: quantitative analysis and model. PLoS One, 6 (5).

Fenu, A, Guglielmi, G, Jimenez, J, Sperandio, M, Saroj, DP, Lesjean, B, Brepols, C, Thoeye, C and Nopens, I (2010) Activated Sludge Model (ASM) based biological modelling of membrane bioreactors (MBR) processes: A critical review with special regard to MBR specificities Water Research, 44 (15). pp. 4272-4294.

Jimenez, JI, Canales, A, Jimenez-Barbero, J, Ginalski, K, Rychlewski, L, Garcia, JL and Diaz, E (2008) Deciphering the genetic determinants for aerobic nicotinic acid degradation: the nic cluster from Pseudomonas putida KT2440. Proceedings of the National Academy of Sciences of USA, 105 (32). pp. 11329-11334.

Yuste, L, Hervas, AB, Canosa, I, Tobes, R, Jimenez, JI, Nogales, J, Perez-Perez, MM, Santero, E, Diaz, E, Ramos, JL, de Lorenzo, V and Rojo, F (2006) Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray ENVIRONMENTAL MICROBIOLOGY, 8 (1). pp. 165-177.

Jimenez, JI, Minambres, B, Garcia, JL and Diaz, E (2002) Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440 ENVIRONMENTAL MICROBIOLOGY, 4 (12). pp. 824-841.

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